Keto Everything Bagel Bake

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These keto everything bagels deliver classic flavors without the carbs. Almond flour forms the base, while mozzarella and cream cheese create a tender, chewy texture that mimics traditional bagels. The dough comes together easily, shaped and topped with a generous sprinkle of everything seasoning. Baked until golden and fragrant, they offer a crisp exterior with a satisfyingly soft bite. They’re perfect warm from the oven—enjoy plain, with cream cheese, or as a sandwich base. Whether for breakfast or a snack, these bagels support a low-carb lifestyle while delivering all the savory appeal you crave.

Ranah
Updated on Tue, 03 Jun 2025 15:43:56 GMT
A plate of poppy seed bagels. Pin it
A plate of poppy seed bagels. | yummyflavorsrecipes.com

These Keto Everything Bagels are a fantastic way to enjoy that classic bagel chew and flavor without feeling weighed down or using traditional flour. I rely on this recipe any time I crave a satisfying breakfast or sandwich base while sticking to low carb eating—no yeast or fancy techniques needed.

I was amazed the first time I tried this dough—I served these to friends and everyone was shocked they were homemade and grain free.

Ingredients

  • Blanched almond flour: gives a light texture and is naturally low in carbs Choose finely ground almond flour for the smoothest bagels
  • Baking powder: helps the bagels rise and get fluffy Go for aluminum free brands if possible
  • Salt: perks up all the flavors Use sea salt for best flavor
  • Shredded mozzarella cheese: forms the chewy base freshly shredded melts best and avoids added starches
  • Cream cheese: guarantees a soft inside and rich taste full fat cream cheese gives best results
  • Eggs: separated because the yolk in the dough adds richness while brushing with egg white gives gloss
  • Everything bagel seasoning: ties it together with garlic onion poppy and sesame seeds Look for one with no added sugar or make your own for full control

Step-by-Step Instructions

Preheat Oven:
Set your oven to 400 degrees F so it is truly hot by the time the bagels are shaped This helps with that golden crust
Mix Dry Ingredients:
Combine blanched almond flour baking powder and salt in a medium bowl Whisk well to evenly distribute the leavening
Melt Cheeses:
Add the shredded mozzarella and cream cheese to a large microwave safe bowl Microwave for 30 seconds at a time stirring in between until completely melted and uniform If you do not have a microwave you can melt it on the stovetop in a nonstick pan over low heat
Add Egg Yolk:
Stir one egg yolk directly into the warm cheese mixture It may seem tricky at first but keep mixing until it comes together The warmth of the cheese helps incorporate the egg
Combine with Dry Mix:
Pour the almond flour mixture into the cheesy egg base Use a sturdy spoon or your hands to knead everything together Mix until there is no visible flour and a sticky dough forms
Shape Bagels:
Divide the dough into four equal pieces Roll each into a fat log then pinch the ends together to form a circle with a large hole in the center The dough is sticky so dampen your hands a bit to help shape it
Egg Wash and Season:
Place the bagels on a parchment lined baking sheet Beat the remaining egg white and brush over the tops and sides Sprinkle generously with everything bagel seasoning so each bite has flavor and crunch
Bake Bagels:
Bake for 10 to 20 minutes depending on your oven and bagel size Watch for puffiness and a deep golden crust They are done when firm to the touch with edges that look toasted
Cool Before Serving:
Let the bagels cool on the pan for at least 5 minutes This makes them easier to slice and gives the cheesy dough a chance to set
A plate of bagels with sesame seeds on top. Pin it
A plate of bagels with sesame seeds on top. | yummyflavorsrecipes.com

I am always impressed by the stretchiness you get from the mozzarella here Every time I pull these out of the oven my family gathers at the counter—my four year old calls them her "cheesy circles" and insists on a double layer of cream cheese.

Storage Tips

Let bagels cool completely before storing Pop them in an airtight container in the fridge and enjoy within five days To keep them longer freeze on a tray then seal in freezer bags They toast back up perfectly for quick mornings

Ingredient Substitutions

If you are dairy sensitive try using a plant based cream cheese and mozzarella alternative Some readers have success making these with other nut flours though almond gives the classic texture You can swap seasoning blends depending on what you love

Serving Suggestions

Slice and toast the bagels then load with smoked salmon avocado egg salad or your favorite sandwich fillings For a simple snack I spread them with soft butter or a swipe of chive cream cheese

A plate of bagels with sesame seeds. Pin it
A plate of bagels with sesame seeds. | yummyflavorsrecipes.com

Cultural Context

Everything bagel seasoning was inspired by the New York classic—a medley of garlic onion sesame and poppy giving each bite a punchy finish These bagels let anyone enjoy the tradition even on a keto lifestyle

Frequently Asked Questions

→ What makes these bagels keto-friendly?

They use almond flour instead of wheat flour, which drastically reduces the carbohydrate content while still delivering a satisfying texture.

→ How do I achieve the classic bagel texture?

Combining mozzarella and cream cheese creates a soft, chewy bite that closely resembles traditional bagels, with a crisp golden exterior from baking.

→ Can I use a different cheese if I don't have mozzarella?

Mozzarella is preferred for its melt and mild flavor, but mild provolone or a similar low-moisture cheese can be substituted if needed.

→ Is the everything bagel seasoning necessary?

The seasoning provides signature bagel flavor from seeds, garlic, and onion, but you can use plain sesame or poppy seeds if desired.

→ Can these bagels be made ahead?

Yes, allow them to cool fully before storing in an airtight container. Reheat briefly in the oven or toaster for best texture.

Keto Everything Bagel Bake

Keto-friendly bagels packed with cheese and classic everything seasoning, baked until golden and delicious.

Prep Time
15 Minutes
Cook Time
20 Minutes
Total Time
35 Minutes
By: Ranah


Difficulty: Intermediate

Cuisine: American

Yield: 4 Servings (4 individual bagels)

Dietary: Low-Carb, Vegetarian, Gluten-Free

Ingredients

→ Dough

01 120 grams blanched almond flour
02 2 teaspoons baking powder
03 0.5 teaspoon fine salt

→ Cheese Mixture

04 170 grams mozzarella cheese, shredded
05 28 grams cream cheese

→ Additional

06 2 eggs, separated
07 2 tablespoons everything bagel seasoning blend

Instructions

Step 01

Preheat the oven to 200°C and line a baking sheet with parchment paper.

Step 02

In a medium mixing bowl, whisk together the almond flour, baking powder, and salt until evenly distributed.

Step 03

Place the shredded mozzarella and cream cheese in a large microwave-safe bowl. Microwave in 30-second intervals, stirring each time, until the cheeses are melted and thoroughly combined.

Step 04

Add one egg to the melted cheese mixture and stir until fully incorporated.

Step 05

Fold the dry ingredients into the cheese and egg mixture. Mix until a cohesive dough forms.

Step 06

Divide the dough into four equal portions. Roll each piece into a disk and use your finger to create a hole in the center, forming a classic bagel shape.

Step 07

Arrange the shaped bagels on the prepared baking sheet. Beat the remaining egg and gently brush the tops of the bagels.

Step 08

Sprinkle each bagel generously with everything bagel seasoning. Bake for 10 to 20 minutes, or until golden brown.

Step 09

Remove from the oven and allow to cool on the tray for at least 5 minutes before serving.

Notes

  1. Dough may appear sticky initially; dampen hands slightly when shaping bagels for easier handling.

Tools You'll Need

  • Medium mixing bowl
  • Large microwave-safe bowl
  • Wooden spoon or spatula
  • Baking sheet
  • Parchment paper
  • Pastry brush

Allergy Information

Please check ingredients for potential allergens and consult a health professional if in doubt.
  • Contains eggs, milk, and nuts (almond flour).

Nutrition Facts (Per Serving)

It is important to consider this information as approximate and not to use it as definitive health advice.
  • Calories: 330
  • Total Fat: 26 g
  • Total Carbohydrate: 6 g
  • Protein: 16 g